導讀： 中文名: 系統進化分析手冊原名: The Phylogenetic Handbook作者: Philippe LemeyMarco SalemiAnne-Mieke Vandamme圖書分類: 科技資源格式: PDF版本: Second Edition出版社: Cambridge University Press書號: 978-0521730716發行 中文名: 系統進化分析手冊原名: The Phylogenetic Handbook作者: Philippe Lemey
Marco Salemi
Anne-Mieke Vandamme圖書分類: 科技資源格式: PDF版本: Second Edition出版社: Cambridge University Press書號: 978-0521730716發行時間: 2009年04月20日地區: 英國語言: 英文簡介:


The Phylogenetic Handbook is a broad, hands on guide to theory and practice of nucleotide and protein phylogenetic analysis. This second edition includes six new chapters, covering topics such as Bayesian inference, tree topology testing and the impact of recombination on phylogenies, as well as a detailed section on molecular adaptation. The book has a stronger focus on hypothesis testing than the previous edition, with more extensive discussions on recombination analysis, detecting molecular adaptation and genealogy-based population genetics. Many chapters include elaborate practical sections, which have been updated to introduce the reader to the most recent versions of sequence analysis and phylogeny software, including BLAST, FastA, Clustal, T-coffee, Muscle, DAMBE, Tree-puzzle, Phylip, MEGA, PAUP*, IQPNNI, CONSEL, ModelTest, Prottest, PAML, HYPHY, MrBayes, BEAST, LAMARC, SplitsTree, and RDP. Many analysis tools are described by their original authors, resulting in clear explanations that constitute an ideal teaching guide for advanced-level undergraduate and graduate students.